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» Structured Prediction Models via the Matrix-Tree Theorem
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BMCBI
2005
116views more  BMCBI 2005»
13 years 7 months ago
SuperLigands - a database of ligand structures derived from the Protein Data Bank
Background: Currently, the PDB contains approximately 29,000 protein structures comprising over 70,000 experimentally determined three-dimensional structures of over 5,000 differe...
Elke Michalsky, Mathias Dunkel, Andrean Goede, Rob...
BMCBI
2010
159views more  BMCBI 2010»
13 years 7 months ago
Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
Background: Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods ha...
Alvaro J. González, Li Liao
IPPS
2006
IEEE
14 years 1 months ago
A performance model for fine-grain accesses in UPC
UPC’s implicit communication and fine-grain programming style make application performance modeling a challenging task. The correspondence between remote references and communi...
Zhang Zhang, S. R. Seidel
JMLR
2011
148views more  JMLR 2011»
13 years 2 months ago
Multitask Sparsity via Maximum Entropy Discrimination
A multitask learning framework is developed for discriminative classification and regression where multiple large-margin linear classifiers are estimated for different predictio...
Tony Jebara
CMPB
2010
97views more  CMPB 2010»
13 years 6 months ago
A ligand predication tool based on modeling and reasoning with imprecise probabilistic knowledge
Ligand prediction has been driven by a fundamental desire to understand more about how biomolecules recognize their ligands and by the commercial imperative to develop new drugs. ...
Weiru Liu, Anbu Yue, David J. Timson