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» Structured Weight-Based Prediction Algorithms
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JMLR
2012
11 years 10 months ago
Transductive Learning of Structural SVMs via Prior Knowledge Constraints
Reducing the number of labeled examples required to learn accurate prediction models is an important problem in structured output prediction. In this paper we propose a new transd...
Chun-Nam Yu
WABI
2010
Springer
188views Bioinformatics» more  WABI 2010»
13 years 6 months ago
Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs
Abstract. We present three heuristic strategies for folding RNA sequences into secondary structures including kissing hairpin motifs. The new idea is to construct a kissing hairpin...
Corinna Theis, Stefan Janssen, Robert Giegerich
FQAS
2009
Springer
125views Database» more  FQAS 2009»
14 years 2 months ago
Predicting Neighbor Goodness in Collaborative Filtering
Performance prediction has gained increasing attention in the IR field since the half of the past decade and has become an established research topic in the field. The present work...
Alejandro Bellogín, Pablo Castells
NAR
2007
124views more  NAR 2007»
13 years 7 months ago
The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures
Many non-coding RNA genes and cis-acting regulatory elements of mRNAs contain RNA secondary structures that are critical for their function. Such functional RNAs can be predicted ...
Andreas R. Gruber, Richard Neuböck, Ivo L. Ho...
GCB
2010
Springer
198views Biometrics» more  GCB 2010»
13 years 5 months ago
RNALfoldz: Efficient Prediction of Thermodynamically Stable, Local Secondary Structures
Abstract: The search for local RNA secondary structures and the annotation of unusually stable folding regions in genomic sequences are two well motivated bioinformatic problems. I...
Andreas R. Gruber, Stephan H. F. Bernhart, You Zho...