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» Structured Weight-Based Prediction Algorithms
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CIKM
2009
Springer
14 years 4 months ago
Effective and efficient structured retrieval
Search engines that support structured documents typically support structure created by the author (e.g., title, section), and may also support structure added by an annotation pr...
Le Zhao, Jamie Callan
BMCBI
2010
161views more  BMCBI 2010»
13 years 10 months ago
FRASS: the web-server for RNA structural comparison
Background: The impressive increase of novel RNA structures, during the past few years, demands automated methods for structure comparison. While many algorithms handle only small...
Svetlana Kirillova, Silvio C. E. Tosatto, Oliviero...
BMCBI
2006
130views more  BMCBI 2006»
13 years 10 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
BMCBI
2006
141views more  BMCBI 2006»
13 years 10 months ago
Identification of consensus RNA secondary structures using suffix arrays
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
Mohammad Anwar, Truong Nguyen, Marcel Turcotte
BMCBI
2006
120views more  BMCBI 2006»
13 years 10 months ago
Classification of protein quaternary structure by functional domain composition
Background: The number and the arrangement of subunits that form a protein are referred to as quaternary structure. Quaternary structure is an important protein attribute that is ...
Xiaojing Yu, Chuan Wang, Yixue Li