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ESA
2004
Springer
124views Algorithms» more  ESA 2004»
13 years 11 months ago
Code Flexibility and Program Efficiency by Genericity: Improving Cgal's Arrangements
Arrangements of planar curves are fundamental structures in computational geometry. We describe the recent developments in the arrangement package of Cgal, the Computational Geomet...
Efi Fogel, Ron Wein, Dan Halperin
ISMB
1997
13 years 9 months ago
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
Amit Pal Singh, Douglas L. Brutlag
GECCO
2003
Springer
120views Optimization» more  GECCO 2003»
14 years 26 days ago
System-Level Synthesis of MEMS via Genetic Programming and Bond Graphs
Initial results have been achieved for automatic synthesis of MEMS system-level lumped parameter models using genetic programming and bond graphs. This paper first discusses the ne...
Zhun Fan, Kisung Seo, Jianjun Hu, Ronald C. Rosenb...
ISMB
1997
13 years 9 months ago
Automated Alignment of RNA Sequences to Pseudoknotted Structures
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
Jack E. Tabaska, Gary D. Stormo
GECCO
2009
Springer
128views Optimization» more  GECCO 2009»
14 years 8 days ago
Evolving stochastic processes using feature tests and genetic programming
The synthesis of stochastic processes using genetic programming is investigated. Stochastic process behaviours take the form of time series data, in which quantities of interest v...
Brian J. Ross, Janine H. Imada