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» Suballowable sequences of permutations
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DAM
2008
101views more  DAM 2008»
13 years 7 months ago
Longest alternating subsequences of k-ary words
Recently, Stanley [13] studied the length of the longest alternating subsequence of a permutation in the symmetric group, where a sequence a, b, c, d, . . . is alternating if a &g...
Toufik Mansour
BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors
Background: The Potato type II (Pot II) family of proteinase inhibitors plays critical roles in the defense system of plants from Solanaceae family against pests. To better unders...
Lesheng Kong, Shoba Ranganathan
DNA
2005
Springer
117views Bioinformatics» more  DNA 2005»
14 years 1 months ago
Simple Operations for Gene Assembly
Abstract. The intramolecular model for gene assembly in ciliates considers three operations, ld, hi, and dlad that can assemble any gene pattern through folding and recombination: ...
Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz ...
CC
2008
Springer
13 years 9 months ago
Generating SIMD Vectorized Permutations
Abstract. This paper introduces a method to generate efficient vectorized implementations of small stride permutations using only vector load and vector shuffle instructions. These...
Franz Franchetti, Markus Püschel
STOC
1993
ACM
109views Algorithms» more  STOC 1993»
13 years 11 months ago
Routing permutations on graphs via matchings
We consider a class of routing problems on connected graphs G. Initially, each vertex v of G is occupied by a “pebble” which has a unique destination π(v) in G (so that π is...
Noga Alon, Fan R. K. Chung, Ronald L. Graham