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» Subsequence Matching on Structured Time Series Data
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TCS
2008
13 years 8 months ago
Algorithms for subsequence combinatorics
A subsequence is obtained from a string by deleting any number of characters; thus in contrast to a substring, a subsequence is not necessarily a contiguous part of the string. Co...
Cees H. Elzinga, Sven Rahmann, Hui Wang
BIOCOMP
2006
13 years 9 months ago
Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
BIBE
2003
IEEE
121views Bioinformatics» more  BIBE 2003»
14 years 1 months ago
Time Series Analysis of Gene Expression and Location Data
We develop a method for integrating time series expression profiles and factor-gene binding data to quantify dynamic aspects of gene regulation. We estimate latencies for transcr...
Chen-Hsiang Yeang, Tommi Jaakkola
ICDM
2009
IEEE
121views Data Mining» more  ICDM 2009»
14 years 3 months ago
Finding Time Series Motifs in Disk-Resident Data
—Time series motifs are sets of very similar subsequences of a long time series. They are of interest in their own right, and are also used as inputs in several higher-level data...
Abdullah Mueen, Eamonn J. Keogh, Nima Bigdely Sham...
IDEAS
2007
IEEE
146views Database» more  IDEAS 2007»
14 years 2 months ago
Approximate Structural Matching over Ordered XML Documents
There is an increasing need for an XML query engine that not only searches for exact matches to a query but also returns “query-like” structures. We have designed and develope...
Nitin Agarwal, Magdiel Galan Oliveras, Yi Chen