166 search results - page 6 / 34 » Suffix trees for very large genomic sequences |
SSDBM
2010
IEEE
14 years 26 days ago
2010
IEEE
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
RECOMB
2005
Springer
14 years 8 months ago
2005
Springer
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
BMCBI
2005
13 years 8 months ago
2005
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
BIRD
2007
Springer
14 years 2 months ago
2007
Springer
We investigate indexing techniques for sequence data, crucial in a wide variety of applications, where efficient, scalable, and versatile search algorithms are required. Recent res...
RECOMB
2003
Springer
14 years 8 months ago
2003
Springer
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...