166 search results - page 7 / 34 » Suffix trees for very large genomic sequences |
CPM
1999
Springer
14 years 24 days ago
1999
Springer
We present a very efficient, in terms of space and access speed, data structure for storing huge natural language data sets. The structure is described as LZ (Ziv Lempel) compresse...
BMCBI
2006
13 years 8 months ago
2006
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
JCB
2006
13 years 8 months ago
2006
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
BNCOD
2003
13 years 10 months ago
2003
There are two aspects to the work being presented here. The first is a novel persistent index structure for genomic data, a prototype of which has been completed. The second, usin...
ISMB
1997
1997
Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags
13 years 10 months ago
Abstract.) Ying Xu, Richard J. MuraF, and Edward C. Uberbacher Computer Science and Mathematics Division and tLife Sciences Division Computational methods for gene identification ...