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BMCBI
2006
155views more  BMCBI 2006»
13 years 7 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
ASIAN
2006
Springer
152views Algorithms» more  ASIAN 2006»
13 years 11 months ago
Inferring Disjunctive Postconditions
Polyhedral analysis [9] is an abstract interpretation used for automatic discovery of invariant linear inequalities among numerical varia program. Convexity of this abstract domain...
Corneliu Popeea, Wei-Ngan Chin
CPHYSICS
2008
123views more  CPHYSICS 2008»
13 years 7 months ago
wannier90: A tool for obtaining maximally-localised Wannier functions
We present wannier90, a program for calculating maximally-localised Wannier functions (MLWF) from a set of Bloch energy bands that may or may not be attached to or mixed with othe...
Arash A. Mostofi, Jonathan R. Yates, Young-Su Lee,...
BMCBI
2005
163views more  BMCBI 2005»
13 years 7 months ago
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
Background -: Sequencing of EST and BAC end datasets is no longer limited to large research groups. Drops in per-base pricing have made high throughput sequencing accessible to in...
Stephen E. Diener, Thomas D. Houfek, Sam E. Kalat,...
DOCENG
2004
ACM
14 years 1 months ago
On modular transformation of structural content
We show that an XML DTD (Document Type Definition) can be viewed as the fixed point of a parametric content model. We then use natural transformations from the source content mo...
Tyng-Ruey Chuang, Jan-Li Lin