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JCB
2008
81views more  JCB 2008»
13 years 7 months ago
Estimating the Ancestral Recombinations Graph (ARG) as Compatible Networks of SNP Patterns
Traditionally nonrecombinant genome, i.e., mtDNA or Y chromosome, has been used for phylogeography, notably for ease of analysis. The topology of the phylogeny structure in this c...
Laxmi Parida, Marta Melé, Francesc Calafell...
ICDM
2008
IEEE
121views Data Mining» more  ICDM 2008»
14 years 2 months ago
Unifying Unknown Nodes in the Internet Graph Using Semisupervised Spectral Clustering
Most research on Internet topology is based on active measurement methods. A major difficulty in using these tools is that one comes across many unresponsive routers. Different m...
Anat Almog, Jacob Goldberger, Yuval Shavitt
RR
2010
Springer
13 years 6 months ago
Redundancy Elimination on RDF Graphs in the Presence of Rules, Constraints, and Queries
Based on practical observations on rule-based inference on RDF data, we study the problem of redundancy elimination on RDF graphs in the presence of rules (in the form of Datalog r...
Reinhard Pichler, Axel Polleres, Sebastian Skritek...
LION
2009
Springer
112views Optimization» more  LION 2009»
14 years 2 months ago
A Graph-Based Semi-supervised Algorithm for Protein Function Prediction from Interaction Maps
Abstract. Protein function prediction represents a fundamental challenge in bioinformatics. The increasing availability of proteomics network data has enabled the development of se...
Valerio Freschi
BIBM
2007
IEEE
135views Bioinformatics» more  BIBM 2007»
14 years 2 months ago
Graph Kernel-Based Learning for Gene Function Prediction from Gene Interaction Network
Prediction of gene functions is a major challenge to biologists in the post-genomic era. Interactions between genes and their products compose networks and can be used to infer ge...
Xin Li, Zhu Zhang, Hsinchun Chen, Jiexun Li