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BMCBI
2006
127views more  BMCBI 2006»
13 years 11 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
BMCBI
2006
94views more  BMCBI 2006»
13 years 11 months ago
Genepi: a blackboard framework for genome annotation
Background: Genome annotation can be viewed as an incremental, cooperative, data-driven, knowledge-based process that involves multiple methods to predict gene locations and struc...
Stéphane Descorps-Declère, Danielle ...
ICWSM
2009
13 years 8 months ago
Gesundheit! Modeling Contagion through Facebook News Feed
Whether they are modeling bookmarking behavior in Flickr or cascades of failure in large networks, models of diffusion often start with the assumption that a few nodes start long ...
Eric Sun, Itamar Rosenn, Cameron Marlow, Thomas M....
SIGSOFT
2005
ACM
14 years 11 months ago
Applying classification techniques to remotely-collected program execution data
There is an increasing interest in techniques that support measurement and analysis of fielded software systems. One of the main goals of these techniques is to better understand ...
Murali Haran, Alan F. Karr, Alessandro Orso, Adam ...
BMCBI
2008
143views more  BMCBI 2008»
13 years 11 months ago
Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
Background: The identification and study of proteins from metagenomic datasets can shed light on the roles and interactions of the source organisms in their communities. However, ...
Shibu Yooseph, Weizhong Li, Granger G. Sutton