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» Support Vector Training of Protein Alignment Models
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BMCBI
2005
155views more  BMCBI 2005»
13 years 7 months ago
Mining protein function from text using term-based support vector machines
Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
BMCBI
2011
13 years 2 months ago
NClassG+: A classifier for non-classically secreted Gram-positive bacterial proteins
Background: Most predictive methods currently available for the identification of protein secretion mechanisms have focused on classically secreted proteins. In fact, only two met...
Daniel Restrepo-Montoya, Camilo Pino, Luis F. Ni&n...
HPDC
2010
IEEE
13 years 8 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
ICANN
2005
Springer
14 years 1 months ago
Training of Support Vector Machines with Mahalanobis Kernels
Abstract. Radial basis function (RBF) kernels are widely used for support vector machines. But for model selection, we need to optimize the kernel parameter and the margin paramete...
Shigeo Abe
ESANN
2000
13 years 8 months ago
Algorithmic approaches to training Support Vector Machines: a survey
: Support Vector Machines (SVMs) have become an increasingly popular tool for machine learning tasks involving classi cation, regression or novelty detection. They exhibit good gen...
Colin Campbell