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» Symmetries and Dynamics of Discrete Systems
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BMCBI
2005
88views more  BMCBI 2005»
13 years 9 months ago
Using large-scale perturbations in gene network reconstruction
Background: Recent analysis of the yeast gene network shows that most genes have few inputs, indicating that enumerative gene reconstruction methods are both useful and computatio...
Thomas MacCarthy, Andrew Pomiankowski, Robert Seym...
ACS
2004
13 years 9 months ago
A Categorical Approach to Threshold Agent Networks
Threshold agent networks (TANs) constitute a discretized modification of threshold (also known as neural) networks that are appropriate for modeling computer simulations. In this p...
George Voutsadakis
RT
2004
Springer
14 years 3 months ago
A Spectral-particle hybrid method for rendering falling snow
Falling snow has the visual property that it is simultaneously a set of discrete moving particles as well as a dynamic texture. To capture the dynamic texture properties of fallin...
Michael S. Langer, Linqiao Zhang, Allison W. Klein...
BMCBI
2004
323views more  BMCBI 2004»
13 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
IFIPTCS
2000
14 years 1 months ago
Masaccio: A Formal Model for Embedded Components
Masaccio is a formal model for hybrid dynamical systems which are built from atomic discrete components (di erence equations) and atomic continuous components (di erential equation...
Thomas A. Henzinger