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BMCBI
2010
183views more  BMCBI 2010»
13 years 7 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
CORR
2008
Springer
118views Education» more  CORR 2008»
13 years 7 months ago
Distributed Constrained Optimization with Semicoordinate Transformations
Recent work has shown how information theory extends conventional full-rationality game theory to allow bounded rational agents. The associated mathematical framework can be used ...
William G. Macready, David Wolpert
BMCBI
2006
129views more  BMCBI 2006»
13 years 7 months ago
EGenBio: A Data Management System for Evolutionary Genomics and Biodiversity
Background: Evolutionary genomics requires management and filtering of large numbers of diverse genomic sequences for accurate analysis and inference on evolutionary processes of ...
Laila A. Nahum, Matthew T. Reynolds, Zhengyuan O. ...
IJHPCA
2008
131views more  IJHPCA 2008»
13 years 7 months ago
De Novo Ultrascale Atomistic Simulations On High-End Parallel Supercomputers
We present a de novo hierarchical simulation framework for first-principles based predictive simulations of materials and their validation on high-end parallel supercomputers and ...
Aiichiro Nakano, Rajiv K. Kalia, Ken-ichi Nomura, ...
ANOR
2004
170views more  ANOR 2004»
13 years 7 months ago
Graph Coloring for Air Traffic Flow Management
The aim of Air Traffic Flow Management (ATFM) is to enhance the capacity of the airspace while satisfying Air Traffic Control constraints and airlines requests to optimize their o...
Nicolas Barnier, Pascal Brisset