While computation of biological information takes center stage in today’s research, knowledge-based query processing in biological databases has not gained much attention. The co...
[6]. An SBML model can be interpreted in Biocham at three abstraction levels: • the Boolean semantics (asynchronuous Boolean state transitions on the presence/absence of molecule...
My talk will be a survey of recent results about the quest for a logic capturing polynomial time. In a fundamental study of database query languages, Chandra and Harel [4] first ra...
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...