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BMCBI
2008
130views more  BMCBI 2008»
13 years 8 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
VLDB
2002
ACM
137views Database» more  VLDB 2002»
13 years 8 months ago
Comparing Data Streams Using Hamming Norms (How to Zero In)
Massive data streams are now fundamental to many data processing applications. For example, Internet routers produce large scale diagnostic data streams. Such streams are rarely s...
Graham Cormode, Mayur Datar, Piotr Indyk, S. Muthu...
RECOMB
2001
Springer
14 years 9 months ago
Finding motifs using random projections
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Jeremy Buhler, Martin Tompa
SADM
2010
128views more  SADM 2010»
13 years 7 months ago
Online training on a budget of support vector machines using twin prototypes
: This paper proposes twin prototype support vector machine (TVM), a constant space and sublinear time support vector machine (SVM) algorithm for online learning. TVM achieves its ...
Zhuang Wang, Slobodan Vucetic
BMCBI
2010
113views more  BMCBI 2010»
13 years 8 months ago
ProbABEL package for genome-wide association analysis of imputed data
Background: Over the last few years, genome-wide association (GWA) studies became a tool of choice for the identification of loci associated with complex traits. Currently, impute...
Yurii S. Aulchenko, Maksim V. Struchalin, Cornelia...