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BMCBI
2006
88views more  BMCBI 2006»
13 years 9 months ago
A two-sample Bayesian t-test for microarray data
Background: Determining whether a gene is differentially expressed in two different samples remains an important statistical problem. Prior work in this area has featured the use ...
Richard J. Fox, Matthew W. Dimmic
BIBM
2009
IEEE
155views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
Towards Reliable Isoform Quantification Using RNA-Seq Data
Background: In eukaryotes, alternative splicing often generates multiple splice variants from a single gene. Here weexplore the use of RNA sequencing (RNA-Seq) datasets to address...
Brian E. Howard, Steffen Heber
BMCBI
2010
176views more  BMCBI 2010»
13 years 9 months ago
Reverse engineering gene regulatory network from microarray data using linear time-variant model
nd: Gene regulatory network is an abstract mapping of gene regulations in living cells that can help to predict the system behavior of living organisms. Such prediction capability...
Mitra Kabir, Nasimul Noman, Hitoshi Iba
NAR
2008
174views more  NAR 2008»
13 years 7 months ago
miRGator: an integrated system for functional annotation of microRNAs
MicroRNAs (miRNAs) constitute an important class of regulators that are involved in various cellular and disease processes. However, the functional significance of each miRNA is m...
Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk ...
JSC
2006
81views more  JSC 2006»
13 years 9 months ago
Complexity bounds for zero-test algorithms
In this paper, we analyze the complexity of a zero test for expressions built from formal power series solutions of first order differential equations with non degenerate initial ...
Joris van der Hoeven, John Shackell