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» The 3-Steiner Root Problem
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ISAAC
2009
Springer
147views Algorithms» more  ISAAC 2009»
14 years 3 months ago
Computing a Smallest Multi-labeled Phylogenetic Tree from Rooted Triplets
Abstract. We investigate the computational complexity of a new combinatorial problem of inferring a smallest possible multi-labeled phylogenetic tree (MUL tree) which is consistent...
Sylvain Guillemot, Jesper Jansson, Wing-Kin Sung
ICALP
2007
Springer
14 years 2 months ago
Parameterized Algorithms for Directed Maximum Leaf Problems
d Abstract) Noga Alon∗ Fedor V. Fomin† Gregory Gutin‡ Michael Krivelevich§ Saket Saurabh¶ We prove that finding a rooted subtree with at least k leaves in a directed grap...
Noga Alon, Fedor V. Fomin, Gregory Gutin, Michael ...
SAT
2010
Springer
174views Hardware» more  SAT 2010»
13 years 7 months ago
A System for Solving Constraint Satisfaction Problems with SMT
Abstract. SAT Modulo Theories (SMT) consists of deciding the satisfiability of a formula with respect to a decidable background theory, such as linear integer arithmetic, bit-vect...
Miquel Bofill, Josep Suy, Mateu Villaret
RECOMB
2012
Springer
11 years 11 months ago
Simultaneous Reconstruction of Multiple Signaling Pathways via the Prize-Collecting Steiner Forest Problem
Signaling networks are essential for cells to control processes such as growth and response to stimuli. Although many “omic” data sources are available to probe signaling pathw...
Nurcan Tuncbag, Alfredo Braunstein, Andrea Pagnani...
SIAMAM
2011
13 years 3 months ago
On Solutions to Equilibrium Problems for Systems of Stiffened Gases
We consider an isolated system of N immiscible fluids, each following a stiffened-gas equation of state. We consider the problem of calculating equilibrium states from the conser...
Tore Flåtten, Alexandre Morin, Svend Tollak ...