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IWPC
2010
IEEE
13 years 6 months ago
DepDigger: A Tool for Detecting Complex Low-Level Dependencies
We present a tool that identifies complex data-flow dependencies on code-level, based on the measure dep-degree. Low-level dependencies between program operations are modeled by...
Dirk Beyer, Ashgan Fararooy
BMCBI
2006
150views more  BMCBI 2006»
13 years 8 months ago
TreeDyn: towards dynamic graphics and annotations for analyses of trees
Background: Analyses of biomolecules for biodiversity, phylogeny or structure/function studies often use graphical tree representations. Many powerful tree editors are now availab...
François Chevenet, Christine Brun, Anne-Lau...
BMCBI
2005
89views more  BMCBI 2005»
13 years 8 months ago
MILANO - custom annotation of microarray results using automatic literature searches
Background: High-throughput genomic research tools are becoming standard in the biologist's toolbox. After processing the genomic data with one of the many available statisti...
Ran Rubinstein, Itamar Simon
BMCBI
2008
155views more  BMCBI 2008»
13 years 8 months ago
ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
Background: Once a new genome is sequenced, one of the important questions is to determine the presence and absence of biological pathways. Analysis of biological pathways in a ge...
Kwangmin Choi, Sun Kim
BMCBI
2006
178views more  BMCBI 2006»
13 years 8 months ago
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool
Background: The Gene Ontology has become an extremely useful tool for the analysis of genomic data and structuring of biological knowledge. Several excellent software tools for na...
Rachel S. G. Sealfon, Matthew A. Hibbs, Curtis Hut...