Given n fragments from k > 2 genomes, we will show how to find an optimal chain of colinear non-overlapping fragments in time O(n logk−2 n log log n) and space O(n logk−2 n...
— The applicability of complex networks of spiking neurons as a general purpose machine learning technique remains open. Building on previous work using macroscopic exploration o...
We present a new algorithm that reduces the space complexity of heuristic search. It is most effective for problem spaces that grow polynomially with problem size, but contain lar...
We describe the theoretical solution of an approximation problem that uses a finite weighted sum of complex exponential functions. The problem arises in an optimization model for t...
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...