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» The Complexity of Probabilistic EL
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BIOCOMP
2007
13 years 9 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci
COMAD
2008
13 years 9 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
SDM
2010
SIAM
158views Data Mining» more  SDM 2010»
13 years 9 months ago
On the Use of Combining Rules in Relational Probability Trees
A relational probability tree (RPT) is a type of decision tree that can be used for probabilistic classification of instances with a relational structure. Each leaf of an RPT cont...
Daan Fierens
ICAI
2007
13 years 9 months ago
Mining and Dynamic Simulation of Sub-Networks from Large Biomolecular Networks
Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As biomolecular...
Xiaohua Hu, Fang-Xiang Wu, Michael K. Ng, Bahrad A...
UAI
2008
13 years 9 months ago
Church: a language for generative models
Formal languages for probabilistic modeling enable re-use, modularity, and descriptive clarity, and can foster generic inference techniques. We introduce Church, a universal langu...
Noah Goodman, Vikash K. Mansinghka, Daniel M. Roy,...