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» The Complexity of Rooted Phylogeny problems
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WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane
IPPS
2007
IEEE
14 years 2 months ago
RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine
Computational phylogeny is a challenging application even for the most powerful supercomputers. It is also an ideal candidate for benchmarking emerging multiprocessor architecture...
Filip Blagojevic, Alexandros Stamatakis, Christos ...
WDAG
2009
Springer
166views Algorithms» more  WDAG 2009»
14 years 2 months ago
New Bounds for the Controller Problem
The (M, W)-controller, originally studied by Afek, Awerbuch, Plotkin, and Saks, is a basic ted tool that provides an abstraction for managing the consumption of a global resource ...
Yuval Emek, Amos Korman
CVIU
2007
193views more  CVIU 2007»
13 years 7 months ago
Interpretation of complex scenes using dynamic tree-structure Bayesian networks
This paper addresses the problem of object detection and recognition in complex scenes, where objects are partially occluded. The approach presented herein is based on the hypothe...
Sinisa Todorovic, Michael C. Nechyba
GECCO
2003
Springer
189views Optimization» more  GECCO 2003»
14 years 26 days ago
A Forest Representation for Evolutionary Algorithms Applied to Network Design
Abstract. Network design involves several areas of engineering and science. Computer networks, electrical circuits, transportation problems, and phylogenetic trees are some example...
Alexandre C. B. Delbem, André Carlos Ponce ...