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» The Context-Dependence of Amino Acid Properties
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ICMENS
2003
IEEE
80views Hardware» more  ICMENS 2003»
14 years 22 days ago
Molecular Dynamics Calculations of the Electrostatic Properties of Tubulin and Their Consequences for Microtubules
crystallographic results were made available through the Protein Data Bank (PDB) (entries: ITUB and IJFF) which allowed us to view the 3D atomic resolution structure oftubulin. (se...
J. A. Tuszynski, E. J. Carpenter, E. Crawford, J. ...
ICIP
2002
IEEE
14 years 9 months ago
Retrieval of 3D protein structures
A protein molecule is made of a long chain of amino acid sequences that fold into a complex three-dimensional structure. It is often the geometrical shapes that determine the prot...
Shann-Ching Chen, Tsuhan Chen
ICAISC
2010
Springer
13 years 9 months ago
Computer Assisted Peptide Design and Optimization with Topology Preserving Neural Networks
Abstract. We propose a non-standard neural network called TPNN which offers the direct mapping from a peptide sequence to a property of interest in order to model the quantitative ...
Jörg D. Wichard, Sebastian Bandholtz, Carsten...
BMCBI
2006
102views more  BMCBI 2006»
13 years 7 months ago
Prediction of protein structural class with Rough Sets
Background: A new method for the prediction of protein structural classes is constructed based on Rough Sets algorithm, which is a rule-based data mining method. Amino acid compos...
Youfang Cao, Shi Liu, Lida Zhang, Jie Qin, Jiang W...
ISMB
1994
13 years 8 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe