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» The Contribution of Free Software to Software Evolution
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BIBM
2007
IEEE
132views Bioinformatics» more  BIBM 2007»
14 years 1 months ago
A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
Feng Yue, Jijun Tang
BIOINFORMATICS
2007
102views more  BIOINFORMATICS 2007»
13 years 7 months ago
OmicBrowse: a browser of multidimensional omics annotations
OmicBrowse is a browser to explore multiple datasets coordinated in the multidimensional omic space integrating omics knowledge ranging from genomes to phenomes and connecting evo...
Tetsuro Toyoda, Yoshiki Mochizuki, Keith Player, N...
CC
2007
Springer
129views System Software» more  CC 2007»
14 years 1 months ago
Extended Linear Scan: An Alternate Foundation for Global Register Allocation
In this paper, we extend past work on Linear Scan register allocation, and propose two Extended Linear Scan (ELS) algorithms that retain the compiletime efficiency of past Linear ...
Vivek Sarkar, Rajkishore Barik
SI3D
2005
ACM
14 years 20 days ago
Volume catcher
It is difficult to obtain a specific region within unsegmented volume data (region of interest, ROI). The user must first segment the volume, a task which itself involves signi...
Shigeru Owada, Frank Nielsen, Takeo Igarashi
ECRTS
2007
IEEE
14 years 1 months ago
Cache-Aware Timing Analysis of Streaming Applications
Of late, there has been a considerable interest in models, algorithms and methodologies specifically targeted towards designing hardware and software for streaming applications. ...
Samarjit Chakraborty, Tulika Mitra, Abhik Roychoud...