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NAR
2008
142views more  NAR 2008»
13 years 7 months ago
CMGSDB: integrating heterogeneous Caenorhabditis elegans data sources using compositional data mining
CMGSDB (Database for Computational Modeling of Gene Silencing) is an integration of heterogeneous data sources about Caenorhabditis elegans with capabilities for compositional dat...
Amrita Pati, Ying Jin, Karsten Klage, Richard F. H...
SIGMOD
2004
ACM
97views Database» more  SIGMOD 2004»
14 years 7 months ago
Integration of Biological Sources: Current Systems and Challenges Ahead
This paper surveys the area of biological and genomic sources integration, which has recently become a major focus of the data integration research field. The challenges that an i...
Thomas Hernandez, Subbarao Kambhampati
BMCBI
2011
13 years 2 months ago
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community
Background: Caenorhabditis elegans gene-based phenotype information dates back to the 1970’s, beginning with Sydney Brenner and the characterization of behavioral and morphologi...
Gary Schindelman, Jolene Fernandes, Carol Bastiani...
WIIW
2001
122views more  WIIW 2001»
13 years 9 months ago
A Framework for Molecular Biology Data Integration
: Molecular biology data are placed in different databases, repositories and flat files, usually distributed over the web. Distinct data models with schemas that are often changing...
Sérgio Lifschitz, Luiz Fernando Bessa Seibe...
SSDBM
2006
IEEE
147views Database» more  SSDBM 2006»
14 years 1 months ago
Task-Oriented Integrated Use of Biological Web Data Sources
Biological web data sources have now become essential information sources for researchers. However, their use is tedious, labor-intensive, repetitive, and possibly involve the int...
Mustafa Kirac, Ali Cakmak, Gultekin Özsoyoglu