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» The Equivalence between Biology and Computation
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JCB
2007
146views more  JCB 2007»
13 years 9 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
SIAMDM
1998
89views more  SIAMDM 1998»
13 years 9 months ago
String Noninclusion Optimization Problems
For every string inclusion relation there are two optimization problems: find a longest string included in every string of a given finite language, and find a shortest string in...
Anatoly R. Rubinov, Vadim G. Timkovsky
ICDM
2010
IEEE
230views Data Mining» more  ICDM 2010»
13 years 7 months ago
Clustering Large Attributed Graphs: An Efficient Incremental Approach
In recent years, many networks have become available for analysis, including social networks, sensor networks, biological networks, etc. Graph clustering has shown its effectivenes...
Yang Zhou, Hong Cheng, Jeffrey Xu Yu
BMCBI
2011
13 years 1 months ago
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks
Background: Flux coupling analysis (FCA) is a useful method for finding dependencies between fluxes of a metabolic network at steady-state. FCA classifies reactions into subsets (...
László Dávid, Sayed-Amir Mara...
ICCV
1995
IEEE
14 years 1 months ago
Fast Object Recognition in Noisy Images Using Simulated Annealing
A fast simulatedannealingalgorithmis developed for automatic object recognition. The object recognition problem is addressed as the problem of best describing a match between a hy...
Margrit Betke, Nicholas C. Makris