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» The Equivalence between Biology and Computation
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AIIA
2005
Springer
14 years 3 months ago
Towards Fault-Tolerant Formal Concept Analysis
Given Boolean data sets which record properties of objects, Formal Concept Analysis is a well-known approach for knowledge discovery. Recent application domains, e.g., for very lar...
Ruggero G. Pensa, Jean-François Boulicaut
AGILEDC
2003
IEEE
14 years 3 months ago
Introducing Agile Development into Bioinformatics: An Experience Report
This experience report describes our efforts to introduce agile development techniques incrementally into our customer’s organization in the National Cancer Institute and develo...
David Kane
BMCBI
2010
176views more  BMCBI 2010»
13 years 10 months ago
TargetSpy: a supervised machine learning approach for microRNA target prediction
Background: Virtually all currently available microRNA target site prediction algorithms require the presence of a (conserved) seed match to the 5' end of the microRNA. Recen...
Martin Sturm, Michael Hackenberg, David Langenberg...
BMCBI
2010
125views more  BMCBI 2010»
13 years 10 months ago
NeatMap - non-clustering heat map alternatives in R
Background: The clustered heat map is the most popular means of visualizing genomic data. It compactly displays a large amount of data in an intuitive format that facilitates the ...
Satwik Rajaram, Yoshi Oono
BIOSYSTEMS
2008
107views more  BIOSYSTEMS 2008»
13 years 10 months ago
The linearity of emergent spectro-temporal receptive fields in a model of auditory cortex
The responses of cortical neurons are often characterized by measuring their spectro-temporal receptive fields (strfs). The strf of a cell can be thought of as a representation of...
Martin Coath, Emili Balaguer-Ballester, Sue L. Den...