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» The Factor Graph Network Model for Biological Systems
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AB
2008
Springer
14 years 3 months ago
Local Structure and Behavior of Boolean Bioregulatory Networks
Abstract. A well-known discrete approach to modeling biological regulatory networks is the logical framework developed by R. Thomas. The network structure is captured in an interac...
Heike Siebert
CMSB
2006
Springer
14 years 11 days ago
Probabilistic Model Checking of Complex Biological Pathways
Abstract. Probabilistic model checking is a formal verification technique that has been successfully applied to the analysis of systems from a broad range of domains, including sec...
John Heath, Marta Z. Kwiatkowska, Gethin Norman, D...
CONNECTION
2006
101views more  CONNECTION 2006»
13 years 8 months ago
High capacity, small world associative memory models
Models of associative memory usually have full connectivity or if diluted, random symmetric connectivity. In contrast, biological neural systems have predominantly local, non-symm...
Neil Davey, Lee Calcraft, Rod Adams
BMCBI
2008
174views more  BMCBI 2008»
13 years 8 months ago
Evolutionary approaches for the reverse-engineering of gene regulatory networks: A study on a biologically realistic dataset
Background: Inferring gene regulatory networks from data requires the development of algorithms devoted to structure extraction. When only static data are available, gene interact...
Cédric Auliac, Vincent Frouin, Xavier Gidro...
BIBE
2009
IEEE
252views Bioinformatics» more  BIBE 2009»
14 years 3 months ago
Multi-Agents System to Model Cell Signalling by Using Fuzzy Cognitive Maps. Application to Computer Simulation of Multiple Myelo
—In order to simulate biological processes, we use multi-agents system. However, modelling cell behavior in systems biology is complex and may be based on intracellular biochemic...
Vincent Rodin, Gabriel Querrec, Pascal Ballet, Fra...