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MICAI
2004
Springer
14 years 2 months ago
A Biologically Motivated and Computationally Efficient Natural Language Processor
Abstract. Conventional artificial neural network models lack many physiological properties of the neuron. Current learning algorithms are more concerned to computational performanc...
João Luís Garcia Rosa
RECOMB
2003
Springer
14 years 9 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...
JMLR
2011
145views more  JMLR 2011»
13 years 3 months ago
Cumulative Distribution Networks and the Derivative-sum-product Algorithm: Models and Inference for Cumulative Distribution Func
We present a class of graphical models for directly representing the joint cumulative distribution function (CDF) of many random variables, called cumulative distribution networks...
Jim C. Huang, Brendan J. Frey
BMCBI
2010
83views more  BMCBI 2010»
13 years 8 months ago
Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Background: Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in...
William P. Kelly, Michael P. H. Stumpf
JIB
2007
136views more  JIB 2007»
13 years 8 months ago
SABIO-RK: A data warehouse for biochemical reactions and their kinetics
Systems biology is an emerging field that aims at obtaining a system-level understanding of biological processes. The modelling and simulation of networks of biochemical reactions...
Olga Krebs, Martin Golebiewski, Renate Kania, Saqi...