Mapping biology into computation has both a domain specific aspect – biological theory – and a methodological aspect – model development. Computational modelers have implici...
Janet Wiles, Nicholas Geard, James Watson, Kai Wil...
In many real-world domains, undirected graphical models such as Markov random fields provide a more natural representation of the dependency structure than directed graphical mode...
Sushmita Roy, Terran Lane, Margaret Werner-Washbur...
Our dynamic graph-based relational mining approach has been developed to learn structural patterns in biological networks as they change over time. The analysis of dynamic network...
Social media such as Web forum often have dense interactions between user and content where network models are often appropriate for analysis. Joint non-negative matrix factorizat...
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...