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TREC
2003
13 years 10 months ago
Knowledge-Based Access to the Bio-Medical Literature, Ontologically-Grounded Experiments for the TREC 2003 Genomics Track
The Tarragon Consulting team participated in the primary task of the TREC 2003 Genomics Track. We used a combination of knowledge-engineering and corpus analysis to construct sema...
Richard Tong, John Quackenbush, Mark Snuffin
TREC
2004
13 years 10 months ago
Identifying Relevant Full-Text Articles for GO Annotation Without MeSH Terms
Gene Ontology (GO) is a controlled vocabulary. Given a gene product, GO enables scientists to clearly and unambiguously describe specific molecular functions of the gene product, ...
Chih Lee, Wen-Juan Hou, Hsin-Hsi Chen
NAR
2006
100views more  NAR 2006»
13 years 8 months ago
The LIFEdb database in 2006
LIFEdb (http://www.LIFEdb.de) integrates data from large-scale functional genomics assays and manual cDNA annotation with bioinformatics gene expression and protein analysis. New ...
Alexander Mehrle, Heiko Rosenfelder, Ingo Schupp, ...
SAC
2010
ACM
14 years 3 months ago
Web-based graphical querying of databases through an ontology: the Wonder system
Biological scientists have made large amounts of data available on the Web, which can be accessed by canned or precomputed queries presented via web forms. To satisfy further info...
Diego Calvanese, C. Maria Keet, Werner Nutt, Maria...
BMCBI
2008
178views more  BMCBI 2008»
13 years 8 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...