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BIBM
2008
IEEE
141views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Protein-Protein Interaction Network Alignment by Quantitative Simulation
We adapt a network simulation algorithm called quantitative simulation (QSim) for use in the alignment of biological networks. Unlike most network alignment methods, QSim finds l...
Perry Evans, Ted Sandler, Lyle H. Ungar
ITNG
2008
IEEE
14 years 3 months ago
GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling
Glycan biosynthesis is the process by which glycans are built in the cells. Information about the process is available from several Web accessible databases, published papers, exp...
Shravya Nimmagadda, Amrita Basu, Matthew Eavenson,...
DILS
2007
Springer
14 years 2 months ago
Using Annotations from Controlled Vocabularies to Find Meaningful Associations
This paper presents the LSLink (or Life Science Link) methodology that provides users with a set of tools to explore the rich Web of interconnected and annotated objects in multipl...
Woei-Jyh Lee, Louiqa Raschid, Padmini Srinivasan, ...
EPIA
2005
Springer
14 years 2 months ago
CONAN: An Integrative System for Biomedical Literature Mining
The amount of information about the genome, transcriptome and proteome, forms a problem for the scientific community: how to find the right information in a reasonable amount of ...
Rainer Malik, Arno Siebes
CSB
2003
IEEE
14 years 1 months ago
Initial Large-scale Exploration of Protein-protein Interactions in Human Brain
Study of protein interaction networks is crucial to post-genomic systems biology. Aided by highthroughput screening technologies, biologists are rapidly accumulating protein-prote...
Jake Yue Chen, Andrey Y. Sivachenko, Russell Bell,...