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» The Importance of Symmetric Representation
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ECEASST
2010
13 years 4 months ago
Safe Integration of Annotated Components in Open Source Projects
: The decision of using existing software components versus building from scratch custom software is one of the most complex and important choices of the entire development/integra...
Sergio Areias, Daniela Carneiro da Cruz, Pedro Ran...
FCSC
2010
238views more  FCSC 2010»
13 years 4 months ago
Knowledge discovery through directed probabilistic topic models: a survey
Graphical models have become the basic framework for topic based probabilistic modeling. Especially models with latent variables have proved to be effective in capturing hidden str...
Ali Daud, Juanzi Li, Lizhu Zhou, Faqir Muhammad
BMCBI
2010
259views more  BMCBI 2010»
13 years 2 months ago
Rule-based spatial modeling with diffusing, geometrically constrained molecules
Background: We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our appro...
Gerd Gruenert, Bashar Ibrahim, Thorsten Lenser, Ma...
BMCBI
2010
123views more  BMCBI 2010»
13 years 2 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
CORR
2011
Springer
188views Education» more  CORR 2011»
13 years 2 months ago
Primitive words and roots of words
In the algebraic theory of codes and formal languages, the set Q of all primitive words over some alphabet Σ has received special interest. With this survey article we give an ove...
Gerhard Lischke