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    ALMOB
    2008
    85views more  ALMOB 2008»
    Noisy: Identification of problematic columns in multiple sequence alignments
    13 years 8 months ago
    Noisy: Identification of problematic columns in multiple sequence alignments
    Download  www.santafe.edu
    Motivation: Sequence-based methods for phylogenetic reconstruction from (nucleic acid) sequence data are notoriously plagued by two effects: homoplasies and alignment errors. Larg...
    Andreas W. M. Dress, Christoph Flamm, Guido Fritzs...
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    ALMOB
    2008
    124views more  ALMOB 2008»
    A scoring matrix approach to detecting miRNA target sites
    13 years 8 months ago
    A scoring matrix approach to detecting miRNA target sites
    Download  www.biomedcentral.com
    Background: Experimental identification of microRNA (miRNA) targets is a difficult and time consuming process. As a consequence several computational prediction methods have been ...
    Simon Moxon, Vincent Moulton, Jan T. Kim
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    ALIFE
    2007
    81views Modeling And Simulation» more  ALIFE 2007»
    Synchronization Phenomena in Surface-Reaction Models of Protocells
    13 years 8 months ago
    Synchronization Phenomena in Surface-Reaction Models of Protocells
    Download  www.fundp.ac.be
    A class of generic models of protocells is introduced, which are inspired by the “Los Alamos bug” is but which, due to their abstraction level, can be applied to a wider set o...
    Roberto Serra, Timoteo Carletti, Irene Poli
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    ALMOB
    2007
    155views more  ALMOB 2007»
    Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
    13 years 8 months ago
    Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
    Download  www.almob.org
    Background: Some amino acid residues functionally interact with each other. This interaction will result in an evolutionary co-variation between these residues – coevolution. Ou...
    Rodrigo Gouveia-Oliveira, Anders Gorm Pedersen
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    BIODATAMINING
    2008
    96views more  BIODATAMINING 2008»
    Fast approximate hierarchical clustering using similarity heuristics
    13 years 8 months ago
    Fast approximate hierarchical clustering using similarity heuristics
    Download  www.biodatamining.org
    Background: Agglomerative hierarchical clustering (AHC) is a common unsupervised data analysis technique used in several biological applications. Standard AHC methods require that...
    Meelis Kull, Jaak Vilo
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