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BMCBI
2002
133views more  BMCBI 2002»
13 years 9 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 4 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...
PCI
2005
Springer
14 years 3 months ago
Protein Classification with Multiple Algorithms
Nowadays, the number of protein sequences being stored in central protein databases from labs all over the world is constantly increasing. From these proteins only a fraction has b...
Sotiris Diplaris, Grigorios Tsoumakas, Pericles A....
NAR
2000
152views more  NAR 2000»
13 years 9 months ago
ASDB: database of alternatively spliced genes
Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to al...
I. Dralyuk, Michael Brudno, Mikhail S. Gelfand, Ma...
CSWWS
2006
14 years 1 months ago
A Distributed Agent System upon Semantic Web Technologies to Provide Biological Data
Bioinformaticians are accustomed to going through analysis steps, in which they employ several data sources, like protein sequence and protein interaction databases, to carry out t...
Farzad Kohantorabi, Gregory Butler, Christopher J....