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    BMCBI
    2010
    150views more  BMCBI 2010»
    AMS 3.0: prediction of post-translational modifications
    13 years 7 months ago
    AMS 3.0: prediction of post-translational modifications
    Download  www.biomedcentral.com
    Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
    Subhadip Basu, Dariusz Plewczynski
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    BMCBI
    2010
    152views more  BMCBI 2010»
    A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
    13 years 7 months ago
    A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
    Download  www.biomedcentral.com
    Background: High-resolution tandem mass spectra can now be readily acquired with hybrid instruments, such as LTQ-Orbitrap and LTQ-FT, in high-throughput shotgun proteomics workflo...
    Chongle Pan, Byung-Hoon Park, William H. McDonald,...
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    NAR
    2007
    155views more  NAR 2007»
    Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
    13 years 7 months ago
    Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
    Download  influenza.big.ac.cn
    Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs...
    Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Z...
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    ISMB
    1996
    155views Computational Biology» more  ISMB 1996»
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    13 years 9 months ago
    Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
    Download  www.aaai.org
    We have developed a hidden Markov model (HMM)to detect the protein coding regions within one megabase contiguous sequence data, registered in a database called GenBankin eight ent...
    Tetsushi Yada, Makoto Hirosawa
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    BMCBI
    2008
    211views more  BMCBI 2008»
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    13 years 7 months ago
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    Download  www.biomedcentral.com
    Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
    Svetlin Manavski, Giorgio Valle
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