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COMAD
2008
13 years 11 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
EMNLP
2008
13 years 11 months ago
HTM: A Topic Model for Hypertexts
Previously topic models such as PLSI (Probabilistic Latent Semantic Indexing) and LDA (Latent Dirichlet Allocation) were developed for modeling the contents of plain texts. Recent...
Congkai Sun, Bin Gao, Zhenfu Cao, Hang Li
NIPS
2008
13 years 11 months ago
Hebbian Learning of Bayes Optimal Decisions
Uncertainty is omnipresent when we perceive or interact with our environment, and the Bayesian framework provides computational methods for dealing with it. Mathematical models fo...
Bernhard Nessler, Michael Pfeiffer, Wolfgang Maass
NIPS
2008
13 years 11 months ago
Relative Performance Guarantees for Approximate Inference in Latent Dirichlet Allocation
Hierarchical probabilistic modeling of discrete data has emerged as a powerful tool for text analysis. Posterior inference in such models is intractable, and practitioners rely on...
Indraneel Mukherjee, David M. Blei
NIPS
2008
13 years 11 months ago
A mixture model for the evolution of gene expression in non-homogeneous datasets
We address the challenge of assessing conservation of gene expression in complex, non-homogeneous datasets. Recent studies have demonstrated the success of probabilistic models in...
Gerald Quon, Yee Whye Teh, Esther Chan, Timothy R....