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    BIBM
    2009
    IEEE
    151views Bioinformatics» more  BIBM 2009»
    Detection of Gene Orthology Based on Protein-Protein Interaction Networks
    14 years 4 months ago
    Detection of Gene Orthology Based on Protein-Protein Interaction Networks
    Download  www.cs.iastate.edu
    Abstract—Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our unde...
    Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
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    TCBB
    2010
    163views more  TCBB 2010»
    Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features
    13 years 4 months ago
    Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features
    Download  informatics.indiana.edu
    Abstract--We participated (as Team 9) in the Article Classification Task of the Biocreative II.5 Challenge: binary classification of fulltext documents relevant for protein-protein...
    Artemy Kolchinsky, Alaa Abi-Haidar, Jasleen Kaur, ...
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    NAACL
    2007
    106views Computational Linguistics» more  NAACL 2007»
    Can Semantic Roles Generalize Across Genres?
    13 years 11 months ago
    Can Semantic Roles Generalize Across Genres?
    Download  acl.ldc.upenn.edu
    PropBank has been widely used as training data for Semantic Role Labeling. However, because this training data is taken from the WSJ, the resulting machine learning models tend to...
    Szu-ting Yi, Edward Loper, Martha Palmer
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    BMCBI
    2010
    102views more  BMCBI 2010»
    SAMPLEX: Automatic mapping of perturbed and unperturbed regions of proteins and complexes
    13 years 10 months ago
    SAMPLEX: Automatic mapping of perturbed and unperturbed regions of proteins and complexes
    Download  www.biomedcentral.com
    Background: The activity of proteins within the cell is characterized by their motions, flexibility, interactions or even the particularly intriguing case of partially unfolded st...
    Mickaël Krzeminski, Karine Loth, Rolf Boelens...
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    TCBB
    2011
    215views Software Engineering» more  TCBB 2011»
    A Partial Set Covering Model for Protein Mixture Identification Using Mass Spectrometry Data
    13 years 4 months ago
    A Partial Set Covering Model for Protein Mixture Identification Using Mass Spectrometry Data
    Download  ihome.ust.hk
    —Protein identification is a key and essential step in mass spectrometry (MS) based proteome research. To date, there are many protein identification strategies that employ eithe...
    Zengyou He, Can Yang, Weichuan Yu
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