Sciweavers

1601 search results - page 8 / 321
» The Protein Data Bank
Sort
View
BMCBI
2010
106views more  BMCBI 2010»
13 years 10 months ago
Multiple structure alignment and consensus identification for proteins
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Ivaylo Ilinkin, Jieping Ye, Ravi Janardan
BMCBI
2008
83views more  BMCBI 2008»
13 years 10 months ago
SSMap: A new UniProt-PDB mapping resource for the curation of structural-related information in the UniProt/Swiss-Prot Knowledge
Background: Sequences and structures provide valuable complementary information on protein features and functions. However, it is not always straightforward for users to gather in...
Fabrice P. A. David, Yum Lina Yip
NAR
2007
91views more  NAR 2007»
13 years 9 months ago
RNABindR: a server for analyzing and predicting RNA-binding sites in proteins
Understanding interactions between proteins and RNA is key to deciphering the mechanisms of many important biological processes. Here we describe RNABindR, a web-based server that...
Michael Terribilini, Jeffry D. Sander, Jae-Hyung L...
BMCBI
2008
144views more  BMCBI 2008»
13 years 10 months ago
PDTD: a web-accessible protein database for drug target identification
Background: Target identification is important for modern drug discovery. With the advances in the development of molecular docking, potential binding proteins may be discovered b...
Zhenting Gao, Honglin Li, Hailei Zhang, Xiaofeng L...
NAR
2008
73views more  NAR 2008»
13 years 9 months ago
LocalMove: computing on-lattice fits for biopolymers
Given an input Protein Data Bank file (PDB) for a protein or RNA molecule, LocalMove is a web server that determines an on-lattice representation for the input biomolecule. The we...
Yann Ponty, R. Istrate, E. Porcelli, Peter Clote