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BMCBI
2008
122views more  BMCBI 2008»
13 years 9 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
BMCBI
2010
136views more  BMCBI 2010»
13 years 8 months ago
Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfa
Background: Many newly detected point mutations are located in protein-coding regions of the human genome. Knowledge of their effects on the protein's 3D structure provides i...
Hanka Venselaar, Tim A. H. te Beek, Remko K. P. Ku...
CORR
2007
Springer
90views Education» more  CORR 2007»
13 years 8 months ago
Discrete Denoising with Shifts
We introduce S-DUDE, a new algorithm for denoising Discrete Memoryless Channel (DMC)-corrupted data. The algorithm, which generalizes the recently introduced DUDE (Discrete Univer...
Taesup Moon, Tsachy Weissman
NC
2008
122views Neural Networks» more  NC 2008»
13 years 8 months ago
Computation with finite stochastic chemical reaction networks
A highly desired part of the synthetic biology toolbox is an embedded chemical microcontroller, capable of autonomously following a logic program specified by a set of instructions...
David Soloveichik, Matthew Cook, Erik Winfree, Jeh...
TCSV
2008
298views more  TCSV 2008»
13 years 8 months ago
TrustStream: A Secure and Scalable Architecture for Large-Scale Internet Media Streaming
Abstract--To effectively address the explosive growth of multimedia applications over the Internet, a large-scale media streaming system has to fully take into account the issues o...
Hao Yin, Chuang Lin, Qian Zhang, Zhijia Chen, Dape...
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