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BMCBI
2011
13 years 6 days ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...
AVI
2008
13 years 11 months ago
Exploring blog archives with interactive visualization
Browsing a blog archive is currently not well supported. Users cannot gain an overview of a blog easily, nor do they receive adequate support for finding potentially interesting e...
Indratmo, Julita Vassileva, Carl Gutwin
MSS
2007
IEEE
82views Hardware» more  MSS 2007»
14 years 2 months ago
Tornado Codes for MAID Archival Storage
This paper examines the application of Tornado Codes, a class of low density parity check (LDPC) erasure codes, to archival storage systems based on massive arrays of idle disks (...
Matthew Woitaszek, Henry M. Tufo
CSE
2008
IEEE
13 years 8 months ago
The Sloan Digital Sky Survey Data Archive Server
The Sloan Digital Sky Survey (SDSS) Data Archive Server (DAS) provides public access to over 12Tb of data in 17 million files produced by the SDSS data reduction pipeline. Many tas...
Eric H. Neilsen Jr.
SAC
2010
ACM
13 years 8 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...