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» The State of Change: A Survey
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BMCBI
2010
149views more  BMCBI 2010»
13 years 10 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...
BMCBI
2008
119views more  BMCBI 2008»
13 years 10 months ago
Integrated multi-level quality control for proteomic profiling studies using mass spectrometry
Background: Proteomic profiling using mass spectrometry (MS) is one of the most promising methods for the analysis of complex biological samples such as urine, serum and tissue fo...
David A. Cairns, David N. Perkins, Anthea J. Stanl...
BMCBI
2008
158views more  BMCBI 2008»
13 years 10 months ago
Real value prediction of protein solvent accessibility using enhanced PSSM features
Background: Prediction of protein solvent accessibility, also called accessible surface area (ASA) prediction, is an important step for tertiary structure prediction directly from...
Darby Tien-Hao Chang, Hsuan-Yu Huang, Yu-Tang Syu,...
CACM
2008
84views more  CACM 2008»
13 years 10 months ago
The emergence of a networking primitive in wireless sensor networks
The wireless sensor network community approached netabstractions as an open question, allowing answers to emerge with time and experience. The Trickle algorithm has become a basic...
Philip Levis, Eric A. Brewer, David E. Culler, Dav...
CGF
2010
189views more  CGF 2010»
13 years 10 months ago
Space-in-Time and Time-in-Space Self-Organizing Maps for Exploring Spatiotemporal Patterns
Spatiotemporal data pose serious challenges to analysts in geographic and other domains. Owing to the complexity of the geospatial and temporal components, this kind of data canno...
Gennady L. Andrienko, Natalia V. Andrienko, Sebast...