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    BMCBI
    2005
    201views more  BMCBI 2005»
    Principal component analysis for predicting transcription-factor binding motifs from array-derived data
    13 years 9 months ago
    Principal component analysis for predicting transcription-factor binding motifs from array-derived data
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    Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
    Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
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    BMCBI
    2005
    97views more  BMCBI 2005»
    Sequence variation in ligand binding sites in proteins
    13 years 9 months ago
    Sequence variation in ligand binding sites in proteins
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    Background: The recent explosion in the availability of complete genome sequences has led to the cataloging of tens of thousands of new proteins and putative proteins. Many of the...
    Thomas J. Magliery, Lynne Regan
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    BMCBI
    2005
    101views more  BMCBI 2005»
    PALSSE: A program to delineate linear secondary structural elements from protein structures
    13 years 9 months ago
    PALSSE: A program to delineate linear secondary structural elements from protein structures
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    Background: The majority of residues in protein structures are involved in the formation of helices and -strands. These distinctive secondary structure patterns can be used to rep...
    Indraneel Majumdar, S. Sri Krishna, Nick V. Grishi...
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    BMCBI
    2005
    100views more  BMCBI 2005»
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
    13 years 9 months ago
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
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    Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
    Elena Rivas
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    BMCBI
    2005
    99views more  BMCBI 2005»
    CGH-Profiler: Data mining based on genomic aberration profiles
    13 years 9 months ago
    CGH-Profiler: Data mining based on genomic aberration profiles
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    Background: CGH-Profiler is a program that supports the analysis of genomic aberrations measured by Comparative Genomic Hybridisation (CGH). Comparative genomic hybridisation (CGH...
    Falk Schubert, Bernhard Tausch, Stefan Joos, Rolan...
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