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NAR
2008
87views more  NAR 2008»
15 years 6 months ago
The CGView Server: a comparative genomics tool for circular genomes
The CGView Server generates graphical maps of circular genomes that show sequence features, base composition plots, analysis results and sequence similarity plots. Sequences can b...
Jason R. Grant, Paul Stothard
NAR
2006
71views more  NAR 2006»
15 years 5 months ago
sgTarget: a target selection resource for structural genomics
sgTarget (http://www.ysbl.york.ac.uk/sgTarget) is a web-based resource to aid the selection and prioritization of candidate proteins for structure determination. The system annota...
Ana P. C. Rodrigues, Barry J. Grant, Roderick E. H...
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NAR
2006
74views more  NAR 2006»
15 years 5 months ago
FlyRNAi: the Drosophila RNAi screening center database
RNA interference (RNAi) has become a powerful tool for genetic screening in Drosophila. At the Drosophila RNAi Screening Center (DRSC), we are using a library of over 21 000 doubl...
Ian Flockhart, Matthew Booker, Amy Kiger, Michael ...
ICMLA
2007
15 years 7 months ago
SVMotif: A Machine Learning Motif Algorithm
We describe SVMotif, a support vector machine-based learning algorithm for identification of cellular DNA transcription factor (TF) motifs extrapolated from known TF-gene interact...
Mark A. Kon, Yue Fan, Dustin T. Holloway, Charles ...
BMCBI
2010
131views more  BMCBI 2010»
15 years 3 months ago
A two-step site and mRNA-level model for predicting microRNA targets
Background: Despite experiments showing that the number of microRNA (miRNA) target sites is critical for miRNA targeting, most existing methods focus on identifying individual miR...
Takaya Saito, Pål Sætrom