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SC
2003
ACM
15 years 11 months ago
A Million-Fold Speed Improvement in Genomic Repeats Detection
This paper presents a novel, parallel algorithm for generating top alignments. Top alignments are used for finding internal repeats in biological sequences like proteins and gene...
John W. Romein, Jaap Heringa, Henri E. Bal
ACNS
2003
Springer
130views Cryptology» more  ACNS 2003»
15 years 11 months ago
Generalized Key-Evolving Signature Schemes or How to Foil an Armed Adversary
Key exposures, known or inconspicuous, are a real security threat. Recovery mechanisms from such exposures are required. For digital signatures such a recovery should ideally —an...
Gene Itkis, Peng Xie
FSTTCS
2003
Springer
15 years 11 months ago
Comparing Sequences with Segment Rearrangements
Computational genomics involves comparing sequences based on “similarity” for detecting evolutionary and functional relationships. Until very recently, available portions of th...
Funda Ergün, S. Muthukrishnan, Süleyman ...
INFOCOM
1999
IEEE
15 years 10 months ago
Multicast Security: A Taxonomy and Some Efficient Constructions
Multicast communication is becoming the basis for a growing number of applications. It is therefore critical to provide sound security mechanisms for multicast communication. Yet, ...
Ran Canetti, Juan A. Garay, Gene Itkis, Daniele Mi...
ACMSE
2007
ACM
15 years 10 months ago
Finding association rules of cis-regulatory elements involved in alternative splicing
Alternative splicing (AS) is a major mechanism to generate protein diversity. A single gene might generate hundreds or even thousands of different proteins. Recently, powerful lar...
Jihye Kim, Sihui Zhao, Steffen Heber