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SIGIR
2005
ACM
14 years 4 months ago
An application of text categorization methods to gene ontology annotation
This paper describes an application of IR and text categorization methods to a highly practical problem in biomedicine, specifically, Gene Ontology (GO) annotation. GO annotation...
Kazuhiro Seki, Javed Mostafa
GECCO
2008
Springer
110views Optimization» more  GECCO 2008»
14 years 23 hour ago
Evolving stable behavior in a spino-neuromuscular system model
This paper demonstrates the effectiveness of genetic algorithms in training stable behavior in a model of the spinoneuromuscular system (SNMS). In particular, we test the stabili...
Stanley Phillips Gotshall, Terry Soule
BCB
2010
138views Bioinformatics» more  BCB 2010»
13 years 6 months ago
Comparative analysis of biclustering algorithms
Biclustering is a very popular method to identify hidden co-regulation patterns among genes. There are numerous biclustering algorithms designed to undertake this challenging task...
Doruk Bozdag, Ashwin S. Kumar, Ümit V. &Ccedi...
GECCO
2006
Springer
220views Optimization» more  GECCO 2006»
14 years 2 months ago
Comparing evolutionary algorithms on the problem of network inference
In this paper, we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different evoluti...
Christian Spieth, Rene Worzischek, Felix Streicher...
BMCBI
2005
80views more  BMCBI 2005»
13 years 11 months ago
Sample phenotype clusters in high-density oligonucleotide microarray data sets are revealed using Isomap, a nonlinear algorithm
Background: Life processes are determined by the organism's genetic profile and multiple environmental variables. However the interaction between these factors is inherently ...
Kevin Dawson, Raymond L. Rodriguez, Wasyl Malyj