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» The approximability of the String Barcoding problem
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MST
2006
149views more  MST 2006»
13 years 7 months ago
Parameterized Intractability of Distinguishing Substring Selection
A central question in computational biology is the design of genetic markers to distinguish between two given sets of (DNA) sequences. This question is formalized as the NP-comple...
Jens Gramm, Jiong Guo, Rolf Niedermeier
FOCS
2005
IEEE
14 years 1 months ago
The Closest Substring problem with small distances
In the CLOSEST SUBSTRING problem k strings s1, ..., sk are given, and the task is to find a string s of length L such that each string si has a consecutive substring of length L ...
Dániel Marx
FOCS
2004
IEEE
13 years 11 months ago
Approximating Edit Distance Efficiently
Edit distance has been extensively studied for the past several years. Nevertheless, no linear-time algorithm is known to compute the edit distance between two strings, or even to...
Ziv Bar-Yossef, T. S. Jayram, Robert Krauthgamer, ...
VLDB
2005
ACM
93views Database» more  VLDB 2005»
14 years 1 months ago
Indexing Mixed Types for Approximate Retrieval
In various applications such as data cleansing, being able to retrieve categorical or numerical attributes based on notions of approximate match (e.g., edit distance, numerical di...
Liang Jin, Nick Koudas, Chen Li, Anthony K. H. Tun...
ICDM
2008
IEEE
120views Data Mining» more  ICDM 2008»
14 years 2 months ago
Parameter Tuning for Differential Mining of String Patterns
Constraint-based mining has been proven to be extremely useful for supporting actionable pattern discovery. However, useful conjunctions of constraints that support domain driven ...
Jérémy Besson, Christophe Rigotti, I...