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» The approximability of the String Barcoding problem
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DEBU
2010
108views more  DEBU 2010»
13 years 7 months ago
Weighted Set-Based String Similarity
Consider a universe of tokens, each of which is associated with a weight, and a database consisting of strings that can be represented as subsets of these tokens. Given a query st...
Marios Hadjieleftheriou, Divesh Srivastava
CPM
2008
Springer
148views Combinatorics» more  CPM 2008»
13 years 8 months ago
On-Line Approximate String Matching with Bounded Errors
We introduce a new dimension to the widely studied on-line approximate string matching problem, by introducing an error threshold parameter so that the algorithm is allowed to mis...
Marcos A. Kiwi, Gonzalo Navarro, Claudio Telha
CORR
2010
Springer
138views Education» more  CORR 2010»
13 years 7 months ago
On building minimal automaton for subset matching queries
We address the problem of building an index for a set D of n strings, where each string location is a subset of some finite integer alphabet of size , so that we can answer effici...
Kimmo Fredriksson
MFCS
2005
Springer
14 years 15 days ago
Explicit Inapproximability Bounds for the Shortest Superstring Problem
Abstract. Given a set of strings S = {s1, . . . , sn}, the Shortest Superstring problem asks for the shortest string s which contains each si as a substring. We consider two measur...
Virginia Vassilevska
CPM
2005
Springer
206views Combinatorics» more  CPM 2005»
14 years 16 days ago
A Fast Algorithm for Approximate String Matching on Gene Sequences
Abstract. Approximate string matching is a fundamental and challenging problem in computer science, for which a fast algorithm is highly demanded in many applications including tex...
Zheng Liu, Xin Chen, James Borneman, Tao Jiang