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BMCBI
2011
12 years 11 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
JCC
2011
154views more  JCC 2011»
12 years 10 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
PLDI
2011
ACM
12 years 10 months ago
Finding and understanding bugs in C compilers
Compilers should be correct. To improve the quality of C compilers, we created Csmith, a randomized test-case generation tool, and spent three years using it to find compiler bug...
Xuejun Yang, Yang Chen, Eric Eide, John Regehr
CADE
2011
Springer
12 years 7 months ago
Experimenting with Deduction Modulo
Deduction modulo is a generic framework to describe proofs in a theory better than using raw axioms. This is done by presenting the theory through rules rewriting terms and proposi...
Guillaume Burel
GAMESEC
2011
344views Game Theory» more  GAMESEC 2011»
12 years 7 months ago
Aegis A Novel Cyber-Insurance Model
Recent works on Internet risk management have proposed the idea of cyber-insurance to eliminate risks due to security threats, which cannot be tackled through traditional means suc...
Ranjan Pal, Leana Golubchik, Konstantinos Psounis
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