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» The challenges of automated methods for integrating systems
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BMCBI
2010
148views more  BMCBI 2010»
13 years 8 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
BMCBI
2005
125views more  BMCBI 2005»
13 years 8 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...
SFM
2011
Springer
253views Formal Methods» more  SFM 2011»
12 years 11 months ago
Application-Layer Connector Synthesis
The heterogeneity characterizing the systems populating the Ubiquitous Computing environment prevents their seamless interoperability. Heterogeneous protocols may be willing to coo...
Paola Inverardi, Romina Spalazzese, Massimo Tivoli
BMCBI
2010
143views more  BMCBI 2010»
13 years 8 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
BTW
2007
Springer
236views Database» more  BTW 2007»
14 years 19 days ago
A Classification of Schema Mappings and Analysis of Mapping Tools
: Schema mapping techniques for data exchange have become popular and useful tools both in research and industry. A schema mapping relates a source schema with a target schema via ...
Frank Legler, Felix Naumann